To test, I created a folder with 3 text files in it, then deleted the entire folder. The following shows the artefacts found in my Recycle Bin:
Ignore the .ORF and .JPG files for now. Note the matching $I and $R 'files' highlighted in red (the $R 'file' is actually a directory).
paladin@paladin:<redacted>$ ls -l total 9 -rwxrwxrwx 1 root root 129 Nov 20 2017 desktop.ini -rwxrwxrwx 1 root root 108 Jul 4 13:35 $I5SL57R.ORF -rwxrwxrwx 1 root root 108 Jul 5 06:44 $I6O696O.ORF -rwxrwxrwx 1 root root 66 Jul 27 06:09 $IBN1JFG -rwxrwxrwx 1 root root 108 Jul 4 13:35 $IFXKF3C.JPG -rwxrwxrwx 1 root root 108 Jul 4 13:35 $IJP866D.JPG -rwxrwxrwx 1 root root 108 Jul 4 13:35 $IK0XWGY.ORF -rwxrwxrwx 1 root root 108 Jul 4 13:34 $IRBWPPL.JPG -rwxrwxrwx 1 root root 108 Jul 4 13:34 $IWMRGZO.ORF drwxrwxrwx 1 root root 4096 Jul 27 06:03 $RBN1JFG
As expected, the $R 'file' contained the contents of the deleted folder, without the accompanying $I files.
paladin@paladin:<redacted>$ ls -l \$RBN1JFG total 2 -rwxrwxrwx 2 root root 76 Jul 27 06:02 file_copy.txt -rwxrwxrwx 2 root root 75 Jul 27 06:02 file_move.txt -rwxrwxrwx 2 root root 70 Jul 27 06:01 file_orig.txt
Looking at the $I file, we can see the original path of the folder, as well as the deleted date of "D0 8D 9F 64 70 25 D4 01" which corresponds to 27 July 2018 06:09:35 UTC+0.
paladin@paladin:<redacted>$ hexdump -e '8/1 "%02X ""\t"" "' -e '8/1 "%c""\n"' \$IBN1JFG 02 00 00 00 00 00 00 00 DD 00 00 00 00 00 00 00 � D0 8D 9F 64 70 25 D4 01 Ѝ�dp%�asdasd 13 00 00 00 43 00 3A 00 C: 5C 00 54 00 65 00 6D 00 \Tem 70 00 5C 00 66 00 6F 00 p\fo 6C 00 64 00 65 00 72 00 lder 5F 00 64 00 65 00 6C 00 _del
The above short experiment explains why certain files in the Recycle Bin are not displayed with their corresponding deletion times in a certain tool, as the tool was not able to match the parent folder's deletion time to the files contained within.
Separately, the .ORF and .JPG $I files were files that I had previously deleted and restored. It would appear that Windows leaves the $I files in the Recycle Bin for restored files and only deletes them if the file in the Recycle Bin was deleted. However that bears more testing/research for another day.
*Update*
Read more on the testing of residual $I files by Phill Moore at ThinkDFIR and Yogesh Khatri.